Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav14n-3A0A075B645 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav14n-3A0A075B645 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav14n-3A0A075B645 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav14n-3A0A075B645 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Dancr-204ENSMUST00000132389 2347 ntBASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Gm5812-201ENSMUST00000061073 957 ntBASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Gm9959-201ENSMUST00000068277 390 ntBASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav14n-3A0A075B645 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav14n-3A0A075B645 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms