Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 BC021767-201ENSMUST00000126387 1716 ntBASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav8n-2A0A075B633 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Gm7213-201ENSMUST00000215977 950 ntBASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Il3ra-202ENSMUST00000223589 738 ntBASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Tgds-204ENSMUST00000228543 1594 ntBASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav8n-2A0A075B633 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav8n-2A0A075B633 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav8n-2A0A075B633 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Gm11355-201ENSMUST00000121120 306 ntBASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Gm29518-201ENSMUST00000190858 372 ntBASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav8n-2A0A075B633 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav8n-2A0A075B633 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav8n-2A0A075B633 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav8n-2A0A075B633 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav8n-2A0A075B633 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav8n-2A0A075B633 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Gm17807-201ENSMUST00000186869 298 ntBASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav8n-2A0A075B633 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav8n-2A0A075B633 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms