Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-1A0A075B601 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.75□□□□□ -0.21
Trav9-1A0A075B601 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-1A0A075B601 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Trav9-1A0A075B601 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9-1A0A075B601 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9-1A0A075B601 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9-1A0A075B601 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9-1A0A075B601 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm7290-201ENSMUST00000104990 617 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm12918-201ENSMUST00000120234 636 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm15710-201ENSMUST00000121821 636 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm5075-201ENSMUST00000196916 622 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.71□□□□□ -0.21
Trav9-1A0A075B601 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav9-1A0A075B601 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav9-1A0A075B601 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav9-1A0A075B601 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9-1A0A075B601 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9-1A0A075B601 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms