Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Nespas-201ENSMUST00000143738 1083 ntBASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-1A0A075B5Z8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gm10418-201ENSMUST00000100943 576 ntBASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gm29791-202ENSMUST00000207888 369 ntBASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-1A0A075B5Z8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-1A0A075B5Z8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-1A0A075B5Z8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-1A0A075B5Z8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-1A0A075B5Z8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-1A0A075B5Z8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.13□□□□□ -0.15
Trav6-1A0A075B5Z8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms