Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav1A0A075B5Z4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav1A0A075B5Z4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav1A0A075B5Z4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav1A0A075B5Z4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Gm11249-201ENSMUST00000117071 859 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Gm10602-201ENSMUST00000098239 609 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav1A0A075B5Z4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav1A0A075B5Z4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav1A0A075B5Z4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms