Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm25843-201ENSMUST00000122582 314 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm23171-201ENSMUST00000157159 264 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm25665-201ENSMUST00000157695 110 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm10074-201ENSMUST00000174543 249 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm27387-201ENSMUST00000184583 116 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm8939-201ENSMUST00000192577 964 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm5842-201ENSMUST00000195073 622 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm19761-201ENSMUST00000205372 391 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Neat1-201ENSMUST00000173672 20771 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm15357-201ENSMUST00000119160 285 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm24371-201ENSMUST00000122662 267 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm24441-201ENSMUST00000157235 281 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm16114-201ENSMUST00000161930 300 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm5558-201ENSMUST00000178933 495 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm21991-201ENSMUST00000180006 508 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm8614-201ENSMUST00000182528 978 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm27818-201ENSMUST00000184536 159 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm4412-201ENSMUST00000186660 433 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm20056-201ENSMUST00000194813 519 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm37490-201ENSMUST00000195566 724 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm5215-201ENSMUST00000054380 405 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Smc1aQ9CU62 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm24541-201ENSMUST00000103871 96 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm25419-201ENSMUST00000104215 191 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm14575-201ENSMUST00000117210 560 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm12261-201ENSMUST00000117499 645 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm15267-201ENSMUST00000120888 464 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm25103-201ENSMUST00000122671 318 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm23902-201ENSMUST00000157571 134 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Mir6416-201ENSMUST00000183664 117 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm37293-201ENSMUST00000191658 295 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm37837-201ENSMUST00000191743 604 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm17953-201ENSMUST00000192061 667 ntBASIC5.31□□□□□ -1.56
Smc1aQ9CU62 Gm38046-201ENSMUST00000192733 550 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms