Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm12401-201ENSMUST00000118435 228 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm3267-201ENSMUST00000118671 473 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm14784-201ENSMUST00000121604 663 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm12854-201ENSMUST00000128518 297 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm17044-201ENSMUST00000168549 828 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm27551-201ENSMUST00000184258 77 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm43828-201ENSMUST00000196890 639 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm43136-201ENSMUST00000200403 636 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm29793-201ENSMUST00000202874 460 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm18409-202ENSMUST00000220105 529 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm36501-201ENSMUST00000221857 745 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm7665-201ENSMUST00000076710 297 ntBASIC4.37□□□□□ -1.71
Use1Q9CQ56 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Use1Q9CQ56 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm16345-201ENSMUST00000146065 158 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm10074-201ENSMUST00000174543 249 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm5558-201ENSMUST00000178933 495 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm18036-201ENSMUST00000195256 272 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm37095-201ENSMUST00000195421 205 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm3816-201ENSMUST00000209803 433 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm19256-201ENSMUST00000218550 231 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 AC152169.2-201ENSMUST00000224558 613 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm6195-201ENSMUST00000063059 357 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm6065-201ENSMUST00000081336 492 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm6043-201ENSMUST00000099961 492 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.36□□□□□ -1.71
Use1Q9CQ56 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Use1Q9CQ56 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms