Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm14943-201ENSMUST00000118056 546 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm14874-201ENSMUST00000118995 438 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm14713-201ENSMUST00000122362 686 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm16129-201ENSMUST00000152628 486 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm23669-201ENSMUST00000157470 128 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm25445-201ENSMUST00000158996 299 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm9569-201ENSMUST00000187492 787 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm28724-202ENSMUST00000194218 295 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm4874-201ENSMUST00000203589 691 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm40598-201ENSMUST00000222953 547 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 AC154594.1-201ENSMUST00000225171 1273 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Mir28a-201ENSMUST00000083560 86 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc9Q8VC31 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Ccdc9Q8VC31 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc9Q8VC31 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Snord65-201ENSMUST00000104269 72 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm14388-201ENSMUST00000118119 477 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm4989-201ENSMUST00000118711 749 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm9428-201ENSMUST00000127214 769 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm22122-201ENSMUST00000175147 200 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm27854-201ENSMUST00000175578 244 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm24407-201ENSMUST00000177864 141 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Mir7235-201ENSMUST00000183796 56 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm38201-201ENSMUST00000192143 387 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm37445-201ENSMUST00000195318 242 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AC159476.2-201ENSMUST00000216221 418 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm5457-201ENSMUST00000022260 333 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 CT009733.1-203ENSMUST00000224033 451 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm16335-201ENSMUST00000077495 309 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm23677-201ENSMUST00000083156 104 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc9Q8VC31 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc9Q8VC31 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms