Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm22741-201ENSMUST00000083438 165 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 AC139218.1-201ENSMUST00000228215 4287 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm6913-201ENSMUST00000100019 348 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm12039-201ENSMUST00000118219 180 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm11484-201ENSMUST00000119808 338 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm16558-201ENSMUST00000163015 532 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm17377-201ENSMUST00000165184 207 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm27025-201ENSMUST00000182392 942 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm38149-201ENSMUST00000191943 339 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm18036-201ENSMUST00000195256 272 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm18325-201ENSMUST00000203228 835 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm2011-203ENSMUST00000203750 435 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 AC142273.1-201ENSMUST00000213723 673 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm6049-201ENSMUST00000222369 458 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm7040-201ENSMUST00000223271 443 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 AC137902.2-201ENSMUST00000227989 576 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Brf1Q8CFK2 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm4342-201ENSMUST00000118982 367 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm11790-201ENSMUST00000119569 455 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm23537-201ENSMUST00000157536 330 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm23700-201ENSMUST00000158842 102 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm38281-201ENSMUST00000192301 315 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm17987-201ENSMUST00000206902 603 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 CT009733.1-201ENSMUST00000225322 425 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm23104-201ENSMUST00000083722 104 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Brf1Q8CFK2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms