Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm9293-201ENSMUST00000223096 306 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm22952-201ENSMUST00000116720 120 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm13114-201ENSMUST00000117605 106 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm8501-201ENSMUST00000117684 432 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm26169-201ENSMUST00000158420 135 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm15900-201ENSMUST00000161584 342 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm8292-201ENSMUST00000162574 396 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm24897-201ENSMUST00000179033 107 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm8816-201ENSMUST00000182280 1163 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Mir6971-201ENSMUST00000183497 63 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm29147-201ENSMUST00000186846 315 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm28160-201ENSMUST00000191229 315 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm2719-201ENSMUST00000191929 444 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm2147-201ENSMUST00000193588 639 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm6719-201ENSMUST00000202067 335 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm35876-201ENSMUST00000205044 459 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
Trim47Q8C0E3 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm13228-201ENSMUST00000118937 634 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm12186-201ENSMUST00000119050 945 ntBASIC6.91□□□□□ -1.3
Trim47Q8C0E3 Gm15106-201ENSMUST00000119691 821 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms