Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm28204-201ENSMUST00000185934 614 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm28290-201ENSMUST00000186505 614 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm28161-201ENSMUST00000186669 614 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm28749-209ENSMUST00000189599 614 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm37050-201ENSMUST00000193464 466 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm33163-201ENSMUST00000194504 614 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm43586-201ENSMUST00000195948 310 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm43015-201ENSMUST00000199087 565 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm9616-201ENSMUST00000221154 781 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm23510-201ENSMUST00000083083 163 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trub1Q8C0D0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm11970-201ENSMUST00000116105 320 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm27896-201ENSMUST00000175162 317 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Mir7056-201ENSMUST00000183776 59 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm27387-201ENSMUST00000184583 116 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm29097-201ENSMUST00000190273 422 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm34224-201ENSMUST00000204606 364 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm44277-201ENSMUST00000205128 649 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm45651-201ENSMUST00000210857 335 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm6988-201ENSMUST00000222676 375 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Trub1Q8C0D0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
Trub1Q8C0D0 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.53□□□□□ -1.69
Trub1Q8C0D0 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.53□□□□□ -1.69
Trub1Q8C0D0 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm14878-201ENSMUST00000118167 293 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm13808-201ENSMUST00000121353 184 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm15796-201ENSMUST00000162135 204 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm3077-201ENSMUST00000165903 627 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm27883-201ENSMUST00000183941 102 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm38046-201ENSMUST00000192733 550 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm43774-201ENSMUST00000196327 878 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm43856-201ENSMUST00000197004 369 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm42566-201ENSMUST00000197120 643 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm5876-201ENSMUST00000203735 243 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm33626-201ENSMUST00000206790 828 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trub1Q8C0D0 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms