Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm24113-201ENSMUST00000157477 276 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm24931-201ENSMUST00000158324 107 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm5558-201ENSMUST00000178933 495 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 AC126275.1-201ENSMUST00000224881 446 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm43312-201ENSMUST00000201655 2466 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim28Q62318 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm23948-201ENSMUST00000104030 132 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm22778-201ENSMUST00000104090 128 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm15421-202ENSMUST00000118224 399 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm11991-201ENSMUST00000119652 1074 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm13484-201ENSMUST00000120738 412 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm13932-201ENSMUST00000120873 610 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm13745-201ENSMUST00000121994 527 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm26098-201ENSMUST00000157247 288 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm27037-201ENSMUST00000182270 960 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Mir6963-201ENSMUST00000183535 71 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm27158-201ENSMUST00000183813 238 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim28Q62318 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm43556-201ENSMUST00000196186 681 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm18100-201ENSMUST00000200897 452 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm32536-201ENSMUST00000205209 445 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm44623-201ENSMUST00000207934 434 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim28Q62318 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 CT009765.2-201ENSMUST00000221331 392 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 AC139845.2-201ENSMUST00000227504 436 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim28Q62318 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Trim28Q62318 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm37115-201ENSMUST00000193750 2849 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.38□□□□□ -1.39
Trim28Q62318 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim28Q62318 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim28Q62318 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim28Q62318 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Trim28Q62318 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim28Q62318 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim28Q62318 Gm17101-201ENSMUST00000169520 1588 ntBASIC6.37□□□□□ -1.39
Trim28Q62318 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms