Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm45651-201ENSMUST00000210857 335 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Upf3bQ3ULL6 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Upf3bQ3ULL6 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Upf3bQ3ULL6 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm15394-201ENSMUST00000119656 1308 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm22473-201ENSMUST00000104114 132 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm14303-201ENSMUST00000121320 171 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm24685-201ENSMUST00000157764 285 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm16589-201ENSMUST00000159522 918 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm6214-201ENSMUST00000178845 541 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm2142-201ENSMUST00000197899 589 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm44038-201ENSMUST00000203952 889 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Upf3bQ3ULL6 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm15752-201ENSMUST00000117427 394 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm12760-201ENSMUST00000117861 482 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm13232-201ENSMUST00000121816 632 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm27468-201ENSMUST00000183577 106 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm38150-201ENSMUST00000192996 452 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm37070-201ENSMUST00000193272 460 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm45359-201ENSMUST00000210635 427 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm16415-201ENSMUST00000080097 489 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm10916-201ENSMUST00000080330 483 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Upf3bQ3ULL6 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm23229-201ENSMUST00000157297 105 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Zakit-201ENSMUST00000157677 308 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm23855-201ENSMUST00000158377 135 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm27690-201ENSMUST00000184596 126 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm36994-201ENSMUST00000192941 492 ntBASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.81□□□□□ -1.64
Upf3bQ3ULL6 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms