Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm6062-201ENSMUST00000120462 631 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm11925-201ENSMUST00000121375 535 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm23186-201ENSMUST00000180078 107 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm27551-201ENSMUST00000184258 77 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm2914-201ENSMUST00000186120 328 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm37219-201ENSMUST00000192036 926 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm37882-201ENSMUST00000195254 196 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm42643-201ENSMUST00000200504 279 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm5374-201ENSMUST00000222868 657 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sox9Q04887 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm24921-201ENSMUST00000083024 107 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sox9Q04887 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Sox9Q04887 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm15385-201ENSMUST00000118725 667 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm16589-201ENSMUST00000159522 918 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm9587-201ENSMUST00000172449 454 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm27236-201ENSMUST00000184147 442 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm29299-201ENSMUST00000185609 923 ntBASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox9Q04887 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms