Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nkx3-1P97436 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm37749-201ENSMUST00000193917 1899 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm42528-201ENSMUST00000200697 3418 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nkx3-1P97436 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm37514-201ENSMUST00000194512 2753 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm42551-201ENSMUST00000197701 1573 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm14575-201ENSMUST00000117210 560 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm14750-201ENSMUST00000118262 516 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm15603-201ENSMUST00000119252 492 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm15745-201ENSMUST00000119807 115 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm6062-201ENSMUST00000120462 631 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm14876-201ENSMUST00000120795 327 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm14369-201ENSMUST00000121355 285 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm13232-201ENSMUST00000121816 632 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm23905-201ENSMUST00000157568 109 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm16566-201ENSMUST00000160387 910 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm3091-201ENSMUST00000163408 484 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Dlx6os1-204ENSMUST00000184182 146 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm43315-201ENSMUST00000198120 313 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm44234-201ENSMUST00000204246 900 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm19201-201ENSMUST00000210127 778 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 AC117237.1-201ENSMUST00000224035 395 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Mir338-201ENSMUST00000083666 98 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 AC168056.3-201ENSMUST00000225395 2540 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm37814-201ENSMUST00000195820 3644 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.99□□□□□ -1.77
Nkx3-1P97436 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nkx3-1P97436 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm42616-201ENSMUST00000198989 4184 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm23746-201ENSMUST00000104229 125 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm23709-201ENSMUST00000104364 130 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm9308-201ENSMUST00000119073 448 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm12994-201ENSMUST00000119601 447 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm17152-201ENSMUST00000172430 535 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm24465-201ENSMUST00000178398 107 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Ighv10-4-201ENSMUST00000193702 299 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm43580-201ENSMUST00000202892 284 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm9560-201ENSMUST00000205012 1201 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 AC161456.1-201ENSMUST00000206771 887 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm7117-201ENSMUST00000071515 387 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Mir99a-201ENSMUST00000083596 65 ntBASIC3.98□□□□□ -1.77
Nkx3-1P97436 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nkx3-1P97436 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms