Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC3□□□□□ -1.93
PrkdcP97313 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PrkdcP97313 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PrkdcP97313 Gm43588-201ENSMUST00000201862 2298 ntBASIC3□□□□□ -1.93
PrkdcP97313 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PrkdcP97313 Gm10241-201ENSMUST00000117664 286 ntBASIC3□□□□□ -1.93
PrkdcP97313 Gm11393-201ENSMUST00000118019 288 ntBASIC3□□□□□ -1.93
PrkdcP97313 Gm13690-201ENSMUST00000118989 285 ntBASIC3□□□□□ -1.93
PrkdcP97313 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3□□□□□ -1.93
PrkdcP97313 Mir1934-201ENSMUST00000158127 83 ntBASIC3□□□□□ -1.93
PrkdcP97313 Gm22243-201ENSMUST00000178754 120 ntBASIC3□□□□□ -1.93
PrkdcP97313 Gm45420-201ENSMUST00000211243 425 ntBASIC3□□□□□ -1.93
PrkdcP97313 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PrkdcP97313 AC158605.3-201ENSMUST00000218999 2538 ntBASIC3□□□□□ -1.93
PrkdcP97313 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 AC156569.1-201ENSMUST00000222020 3841 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm44518-201ENSMUST00000208080 4370 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm15394-201ENSMUST00000119656 1308 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm26607-201ENSMUST00000180661 867 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm37050-201ENSMUST00000193464 466 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC2.99□□□□□ -1.93
PrkdcP97313 AC129085.3-201ENSMUST00000225686 1705 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm42611-201ENSMUST00000199446 3407 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm24831-201ENSMUST00000116778 126 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm11708-201ENSMUST00000119530 832 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm25908-201ENSMUST00000157624 98 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm22160-201ENSMUST00000158405 328 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm38360-201ENSMUST00000195130 454 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm37614-201ENSMUST00000195645 210 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm19170-201ENSMUST00000212440 1084 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 AC144772.3-201ENSMUST00000228829 3126 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm11255-201ENSMUST00000120448 1180 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm32536-201ENSMUST00000205209 445 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm45359-201ENSMUST00000210635 427 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Gm8288-201ENSMUST00000223406 593 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 AC162183.1-202ENSMUST00000225434 904 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PrkdcP97313 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Gm45424-201ENSMUST00000210575 3300 ntBASIC2.99□□□□□ -1.93
PrkdcP97313 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC2.99□□□□□ -1.93
PrkdcP97313 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PrkdcP97313 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PrkdcP97313 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm13268-201ENSMUST00000117485 433 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm24944-201ENSMUST00000158330 128 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Gm18877-201ENSMUST00000207706 539 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
PrkdcP97313 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
PrkdcP97313 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.98□□□□□ -1.93
PrkdcP97313 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC2.98□□□□□ -1.93
PrkdcP97313 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PrkdcP97313 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PrkdcP97313 AC153729.4-201ENSMUST00000217582 3826 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms