Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22343-201ENSMUST00000122648 286 ntBASIC5.14□□□□□ -1.59
NcanP55066 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC5.14□□□□□ -1.59
NcanP55066 Gm23782-201ENSMUST00000157939 120 ntBASIC5.14□□□□□ -1.59
NcanP55066 Gm23897-201ENSMUST00000158110 158 ntBASIC5.14□□□□□ -1.59
NcanP55066 Gm22536-201ENSMUST00000158171 134 ntBASIC5.14□□□□□ -1.59
NcanP55066 Gm6650-201ENSMUST00000166710 614 ntBASIC5.14□□□□□ -1.59
NcanP55066 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.14□□□□□ -1.59
NcanP55066 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NcanP55066 Gm29588-201ENSMUST00000185738 298 ntBASIC5.14□□□□□ -1.59
NcanP55066 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.14□□□□□ -1.59
NcanP55066 Gm18426-201ENSMUST00000191874 973 ntBASIC5.14□□□□□ -1.59
NcanP55066 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Gm19104-201ENSMUST00000198392 679 ntBASIC5.14□□□□□ -1.59
NcanP55066 Gm8703-201ENSMUST00000203793 730 ntBASIC5.14□□□□□ -1.59
NcanP55066 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC5.14□□□□□ -1.59
NcanP55066 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.14□□□□□ -1.59
NcanP55066 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC5.14□□□□□ -1.59
NcanP55066 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.14□□□□□ -1.59
NcanP55066 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC5.14□□□□□ -1.59
NcanP55066 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.14□□□□□ -1.59
NcanP55066 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.14□□□□□ -1.59
NcanP55066 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NcanP55066 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
NcanP55066 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.14□□□□□ -1.59
NcanP55066 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NcanP55066 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.13□□□□□ -1.59
NcanP55066 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm37470-201ENSMUST00000193378 2798 ntBASIC5.13□□□□□ -1.59
NcanP55066 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm13250-201ENSMUST00000117209 753 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm22059-201ENSMUST00000157544 104 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm24751-201ENSMUST00000157844 102 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm24363-201ENSMUST00000158440 311 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm24175-201ENSMUST00000158931 129 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.13□□□□□ -1.59
NcanP55066 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm27818-201ENSMUST00000184536 159 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm9569-201ENSMUST00000187492 787 ntBASIC5.13□□□□□ -1.59
NcanP55066 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm29747-201ENSMUST00000194764 585 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.13□□□□□ -1.59
NcanP55066 Gm44869-201ENSMUST00000208836 357 ntBASIC5.13□□□□□ -1.59
NcanP55066 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NcanP55066 Gm4928-201ENSMUST00000219622 850 ntBASIC5.13□□□□□ -1.59
NcanP55066 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
NcanP55066 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NcanP55066 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NcanP55066 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.13□□□□□ -1.59
NcanP55066 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.13□□□□□ -1.59
NcanP55066 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NcanP55066 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.13□□□□□ -1.59
NcanP55066 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NcanP55066 Gm37011-201ENSMUST00000195543 2935 ntBASIC5.13□□□□□ -1.59
NcanP55066 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
NcanP55066 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.13□□□□□ -1.59
NcanP55066 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NcanP55066 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.12□□□□□ -1.59
NcanP55066 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.12□□□□□ -1.59
NcanP55066 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Gm14981-201ENSMUST00000117325 943 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm5757-201ENSMUST00000117494 528 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm12222-201ENSMUST00000121368 260 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.12□□□□□ -1.59
NcanP55066 Gm8498-201ENSMUST00000188227 974 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm29489-201ENSMUST00000188934 324 ntBASIC5.12□□□□□ -1.59
NcanP55066 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm42830-201ENSMUST00000196642 313 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm20940-201ENSMUST00000197308 360 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm43559-201ENSMUST00000198755 466 ntBASIC5.12□□□□□ -1.59
NcanP55066 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm44816-201ENSMUST00000206666 477 ntBASIC5.12□□□□□ -1.59
NcanP55066 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Gm19921-201ENSMUST00000210505 703 ntBASIC5.12□□□□□ -1.59
NcanP55066 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC5.12□□□□□ -1.59
NcanP55066 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.12□□□□□ -1.59
NcanP55066 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NcanP55066 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NcanP55066 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
NcanP55066 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NcanP55066 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.12□□□□□ -1.59
NcanP55066 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms