Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm24160-201ENSMUST00000104594 126 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm11438-201ENSMUST00000121582 189 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.17□□□□□ -1.42
Sox1P53783 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm23760-201ENSMUST00000158350 116 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm24081-201ENSMUST00000175177 125 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm26993-201ENSMUST00000182766 789 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28604-201ENSMUST00000186629 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28566-201ENSMUST00000186714 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm17929-201ENSMUST00000186851 627 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28194-201ENSMUST00000187412 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28886-202ENSMUST00000187889 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28554-202ENSMUST00000189175 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29213-202ENSMUST00000189703 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28851-202ENSMUST00000189757 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28461-201ENSMUST00000190023 484 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sox1P53783 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm6543-201ENSMUST00000197353 808 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.17□□□□□ -1.42
Sox1P53783 Gm10988-201ENSMUST00000209150 1088 ntBASIC6.17□□□□□ -1.42
Sox1P53783 Gm7530-201ENSMUST00000218466 605 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms