Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col18a1P39061 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col18a1P39061 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Col18a1P39061 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col18a1P39061 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm37661-201ENSMUST00000191863 1550 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col18a1P39061 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm24403-201ENSMUST00000104616 130 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm13751-201ENSMUST00000120280 752 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.72□□□□□ -1.33
Col18a1P39061 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm25748-201ENSMUST00000175487 70 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm27688-201ENSMUST00000183634 91 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm44134-202ENSMUST00000204777 545 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 AC119573.1-201ENSMUST00000227960 757 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr192-201ENSMUST00000080251 925 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm22575-201ENSMUST00000082981 110 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm13058-201ENSMUST00000117097 1435 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm15058-201ENSMUST00000117689 458 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm15785-201ENSMUST00000119145 694 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.72□□□□□ -1.33
Col18a1P39061 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm29598-201ENSMUST00000188996 588 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm43144-201ENSMUST00000198256 485 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Gm31532-201ENSMUST00000203555 767 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm45156-201ENSMUST00000207255 439 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Diaph3-206ENSMUST00000226745 713 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Gm24166-201ENSMUST00000082724 135 ntBASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col18a1P39061 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col18a1P39061 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col18a1P39061 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Col18a1P39061 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Col18a1P39061 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC6.71□□□□□ -1.33
Col18a1P39061 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col18a1P39061 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Col18a1P39061 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.71□□□□□ -1.33
Col18a1P39061 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col18a1P39061 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col18a1P39061 Gm13459-201ENSMUST00000121558 646 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Gm16471-201ENSMUST00000121940 618 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Gm11506-201ENSMUST00000122414 470 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Gm25907-201ENSMUST00000158486 125 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Gm16134-201ENSMUST00000161714 336 ntBASIC6.71□□□□□ -1.34
Col18a1P39061 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col18a1P39061 Gm27414-201ENSMUST00000185033 381 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms