Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col2a1P28481 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm11506-201ENSMUST00000122414 470 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm10059-201ENSMUST00000131139 171 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm23905-201ENSMUST00000157568 109 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm17109-201ENSMUST00000163985 358 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm5258-201ENSMUST00000165437 327 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm27899-201ENSMUST00000184715 64 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm38270-201ENSMUST00000192721 407 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm42991-201ENSMUST00000196468 3837 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm43856-201ENSMUST00000197004 369 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.06□□□□□ -1.6
Col2a1P28481 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm45434-201ENSMUST00000210550 293 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Col2a1P28481 AC132315.1-201ENSMUST00000221771 390 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.06□□□□□ -1.6
Col2a1P28481 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col2a1P28481 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Col2a1P28481 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col2a1P28481 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.06□□□□□ -1.6
Col2a1P28481 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col2a1P28481 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col2a1P28481 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col2a1P28481 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Gm27976-201ENSMUST00000183635 162 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Mir7658-201ENSMUST00000184043 57 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col2a1P28481 Gm8790-201ENSMUST00000194108 322 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Gm42566-201ENSMUST00000197120 643 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Gm44389-201ENSMUST00000203795 182 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
Col2a1P28481 Gm25134-201ENSMUST00000082646 160 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col2a1P28481 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col2a1P28481 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col2a1P28481 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.05□□□□□ -1.6
Col2a1P28481 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Col2a1P28481 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm5379-201ENSMUST00000120973 826 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm25908-201ENSMUST00000157624 98 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 Mir5106-201ENSMUST00000174936 73 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm9443-201ENSMUST00000188406 816 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 Gm43604-201ENSMUST00000199799 705 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm45171-201ENSMUST00000206360 736 ntBASIC5.04□□□□□ -1.6
Col2a1P28481 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Col2a1P28481 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col2a1P28481 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.03□□□□□ -1.6
Col2a1P28481 Gm24730-201ENSMUST00000158228 117 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm25447-201ENSMUST00000158997 128 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm27695-201ENSMUST00000184301 91 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm27457-201ENSMUST00000184771 156 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm9057-201ENSMUST00000198791 296 ntBASIC5.03□□□□□ -1.6
Col2a1P28481 Gm8556-201ENSMUST00000210437 664 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms