Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm44092-201ENSMUST00000204470 258 ntBASIC5.09□□□□□ -1.59
BdnfP21237 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.09□□□□□ -1.59
BdnfP21237 Gm45171-201ENSMUST00000206360 736 ntBASIC5.09□□□□□ -1.59
BdnfP21237 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.09□□□□□ -1.59
BdnfP21237 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
BdnfP21237 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.09□□□□□ -1.59
BdnfP21237 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
BdnfP21237 Gm22575-201ENSMUST00000082981 110 ntBASIC5.09□□□□□ -1.59
BdnfP21237 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BdnfP21237 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BdnfP21237 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BdnfP21237 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BdnfP21237 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BdnfP21237 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BdnfP21237 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.09□□□□□ -1.6
BdnfP21237 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
BdnfP21237 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BdnfP21237 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BdnfP21237 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BdnfP21237 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BdnfP21237 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BdnfP21237 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BdnfP21237 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm16394-201ENSMUST00000117289 675 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm15185-201ENSMUST00000117397 746 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm11984-201ENSMUST00000118142 766 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm13013-201ENSMUST00000119087 523 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm12303-201ENSMUST00000119506 673 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm25553-201ENSMUST00000158076 79 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm22411-201ENSMUST00000175462 126 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm25246-201ENSMUST00000175476 69 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm22002-201ENSMUST00000175622 125 ntBASIC5.08□□□□□ -1.6
BdnfP21237 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Gm27754-201ENSMUST00000183340 126 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm18177-201ENSMUST00000188373 404 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm18952-201ENSMUST00000194471 846 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.08□□□□□ -1.6
BdnfP21237 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm7407-201ENSMUST00000208301 568 ntBASIC5.08□□□□□ -1.6
BdnfP21237 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.08□□□□□ -1.6
BdnfP21237 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.08□□□□□ -1.6
BdnfP21237 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BdnfP21237 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BdnfP21237 Mir298-201ENSMUST00000083476 82 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.08□□□□□ -1.6
BdnfP21237 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.08□□□□□ -1.6
BdnfP21237 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BdnfP21237 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC5.08□□□□□ -1.6
BdnfP21237 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
BdnfP21237 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BdnfP21237 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BdnfP21237 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BdnfP21237 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BdnfP21237 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
BdnfP21237 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BdnfP21237 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BdnfP21237 Gm23431-201ENSMUST00000104006 107 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Gm24235-201ENSMUST00000104319 129 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Mir292-201ENSMUST00000104847 82 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Gm11821-201ENSMUST00000117335 979 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Gm12244-201ENSMUST00000119500 291 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Gm23211-201ENSMUST00000122717 308 ntBASIC5.07□□□□□ -1.6
BdnfP21237 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BdnfP21237 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.07□□□□□ -1.6
BdnfP21237 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BdnfP21237 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms