Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14070-201ENSMUST00000120773 428 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm6565-201ENSMUST00000121217 438 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm15147-201ENSMUST00000122263 483 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm22843-201ENSMUST00000157710 134 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm23553-201ENSMUST00000157817 295 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm23779-201ENSMUST00000157938 64 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm24682-201ENSMUST00000158764 137 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm17217-201ENSMUST00000166613 469 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm37272-201ENSMUST00000193401 488 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm2979-201ENSMUST00000193442 463 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm22897-202ENSMUST00000197782 127 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm43141-201ENSMUST00000199695 274 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm43725-201ENSMUST00000200122 369 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm44513-201ENSMUST00000206811 439 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm45395-201ENSMUST00000209891 559 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 CT030705.1-201ENSMUST00000223971 533 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm25126-201ENSMUST00000083343 102 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm6361-201ENSMUST00000091031 435 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm29670-201ENSMUST00000190228 2491 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm28379-202ENSMUST00000187676 2896 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm44723-201ENSMUST00000207369 4000 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm6011-201ENSMUST00000211736 1796 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm24473-201ENSMUST00000104483 131 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm16073-201ENSMUST00000116032 517 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm13428-201ENSMUST00000117540 365 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm13550-201ENSMUST00000118185 525 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm14669-201ENSMUST00000118841 250 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm5843-201ENSMUST00000121631 476 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm23740-201ENSMUST00000157385 100 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm20549-201ENSMUST00000174804 429 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm22259-201ENSMUST00000178926 107 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm29159-201ENSMUST00000187969 379 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm37620-201ENSMUST00000192910 501 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm42570-201ENSMUST00000195937 292 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm4332-201ENSMUST00000196114 346 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm5711-201ENSMUST00000197896 421 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm44411-201ENSMUST00000204172 349 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm44856-201ENSMUST00000206639 304 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm5457-201ENSMUST00000022260 333 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Gm25482-201ENSMUST00000083225 107 ntBASIC5.32□□□□□ -1.56
Hoxd3P09027 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Hoxd3P09027 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Hoxd3P09027 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms