Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.81□□□□□ -1.64
TnfP06804 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TnfP06804 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TnfP06804 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TnfP06804 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.81□□□□□ -1.64
TnfP06804 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TnfP06804 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TnfP06804 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.8□□□□□ -1.64
TnfP06804 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm15385-201ENSMUST00000118725 667 ntBASIC4.8□□□□□ -1.64
TnfP06804 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.8□□□□□ -1.64
TnfP06804 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.8□□□□□ -1.64
TnfP06804 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.8□□□□□ -1.64
TnfP06804 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.8□□□□□ -1.64
TnfP06804 Gm22601-201ENSMUST00000157595 250 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm25264-201ENSMUST00000158519 117 ntBASIC4.8□□□□□ -1.64
TnfP06804 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.8□□□□□ -1.64
TnfP06804 Gm23638-201ENSMUST00000175073 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm23158-201ENSMUST00000175076 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm22907-201ENSMUST00000175198 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm22625-201ENSMUST00000175382 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm22875-201ENSMUST00000175449 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm25197-201ENSMUST00000175516 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm27857-201ENSMUST00000176930 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm22395-201ENSMUST00000177427 96 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm26268-201ENSMUST00000177685 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm23681-201ENSMUST00000178821 126 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Gm8823-201ENSMUST00000193158 433 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm37095-201ENSMUST00000195421 205 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Gm44485-201ENSMUST00000199569 137 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm45359-201ENSMUST00000210635 427 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.8□□□□□ -1.64
TnfP06804 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
TnfP06804 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TnfP06804 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TnfP06804 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.8□□□□□ -1.64
TnfP06804 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TnfP06804 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Mir761-201ENSMUST00000103245 76 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm24125-201ENSMUST00000104105 137 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm15058-201ENSMUST00000117689 458 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm14352-201ENSMUST00000119250 449 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm12884-201ENSMUST00000120371 325 ntBASIC4.79□□□□□ -1.64
TnfP06804 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm25290-201ENSMUST00000122796 144 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm27896-201ENSMUST00000175162 317 ntBASIC4.79□□□□□ -1.64
TnfP06804 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm6214-201ENSMUST00000178845 541 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.79□□□□□ -1.64
TnfP06804 Gm21803-201ENSMUST00000188897 693 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.79□□□□□ -1.64
TnfP06804 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.79□□□□□ -1.64
TnfP06804 Gm43370-201ENSMUST00000196437 284 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.79□□□□□ -1.64
TnfP06804 Gm44277-201ENSMUST00000205128 649 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm17811-201ENSMUST00000206193 387 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm45845-201ENSMUST00000207326 582 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.79□□□□□ -1.64
TnfP06804 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TnfP06804 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TnfP06804 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.79□□□□□ -1.64
TnfP06804 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.79□□□□□ -1.64
TnfP06804 Gm9616-201ENSMUST00000221154 781 ntBASIC4.79□□□□□ -1.64
TnfP06804 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.79□□□□□ -1.64
TnfP06804 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.79□□□□□ -1.64
TnfP06804 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TnfP06804 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm23099-201ENSMUST00000083454 139 ntBASIC4.79□□□□□ -1.64
TnfP06804 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TnfP06804 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.79□□□□□ -1.64
TnfP06804 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.79□□□□□ -1.64
TnfP06804 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TnfP06804 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms