Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm25726-201ENSMUST00000104529 129 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Mir290a-201ENSMUST00000104627 83 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm14750-201ENSMUST00000118262 516 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm11781-201ENSMUST00000118328 472 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm12884-201ENSMUST00000120371 325 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm17046-201ENSMUST00000168078 850 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm23638-201ENSMUST00000175073 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm23158-201ENSMUST00000175076 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm22907-201ENSMUST00000175198 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm22625-201ENSMUST00000175382 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm22875-201ENSMUST00000175449 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm25197-201ENSMUST00000175516 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm27857-201ENSMUST00000176930 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm26268-201ENSMUST00000177685 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm23681-201ENSMUST00000178821 126 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Mir6960-201ENSMUST00000183449 61 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Mir6391-201ENSMUST00000184391 104 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm29196-201ENSMUST00000189239 618 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm38217-201ENSMUST00000194358 910 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm43370-201ENSMUST00000196437 284 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm43655-201ENSMUST00000197367 222 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm42666-201ENSMUST00000201954 152 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.46□□□□□ -1.7
Bhlhe40O35185 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Bhlhe40O35185 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm12062-201ENSMUST00000117533 259 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm11698-201ENSMUST00000117948 455 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm29228-201ENSMUST00000185489 418 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm28615-201ENSMUST00000187527 482 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm29668-201ENSMUST00000187802 315 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm43596-201ENSMUST00000202818 884 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm43580-201ENSMUST00000202892 284 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm19131-201ENSMUST00000203408 789 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm44623-201ENSMUST00000207934 434 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.45□□□□□ -1.7
Bhlhe40O35185 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Bhlhe40O35185 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm11970-201ENSMUST00000116105 320 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm13232-201ENSMUST00000121816 632 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm22958-201ENSMUST00000122512 184 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm27896-201ENSMUST00000175162 317 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm19898-201ENSMUST00000177490 251 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm6863-201ENSMUST00000052882 636 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Bhlhe40O35185 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.44□□□□□ -1.7
Bhlhe40O35185 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms