Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NpcdF8VQB8 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NpcdF8VQB8 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
NpcdF8VQB8 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NpcdF8VQB8 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NpcdF8VQB8 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NpcdF8VQB8 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm22080-201ENSMUST00000157591 106 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm28343-201ENSMUST00000185386 112 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm28066-201ENSMUST00000188657 472 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm21735-201ENSMUST00000190360 696 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Igkv15-101-201ENSMUST00000195917 299 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm43078-201ENSMUST00000197222 168 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm17775-201ENSMUST00000198542 258 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm21041-201ENSMUST00000214829 823 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NpcdF8VQB8 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.91□□□□□ -1.3
NpcdF8VQB8 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NpcdF8VQB8 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm16436-201ENSMUST00000121510 1607 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm13806-201ENSMUST00000117822 325 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm7927-201ENSMUST00000118818 880 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm13000-201ENSMUST00000120937 496 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm14411-201ENSMUST00000121798 914 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm23954-201ENSMUST00000157213 353 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm26349-201ENSMUST00000157530 130 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm24939-201ENSMUST00000158325 137 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28604-201ENSMUST00000186629 484 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28566-201ENSMUST00000186714 484 ntBASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NpcdF8VQB8 Gm28194-201ENSMUST00000187412 484 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms