Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm25962-201ENSMUST00000157173 168 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm25395-201ENSMUST00000157343 272 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm20690-201ENSMUST00000177341 315 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm14596-201ENSMUST00000180268 537 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm14595-201ENSMUST00000180335 537 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Mir6238-201ENSMUST00000184140 129 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm7867-201ENSMUST00000189856 546 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm37743-201ENSMUST00000194645 376 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm43825-201ENSMUST00000199650 734 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm44091-201ENSMUST00000205212 649 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm6887-201ENSMUST00000080945 482 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm23054-201ENSMUST00000082804 162 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Mir106b-201ENSMUST00000083580 82 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim39Q9ESN2 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.99□□□□□ -1.45
Trim39Q9ESN2 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm25593-201ENSMUST00000102272 96 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm26079-201ENSMUST00000104066 133 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm13265-201ENSMUST00000118090 421 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm13835-201ENSMUST00000118459 685 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm11262-201ENSMUST00000119326 833 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm12924-201ENSMUST00000121747 318 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm2020-201ENSMUST00000145242 579 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm22915-201ENSMUST00000157615 136 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm24781-201ENSMUST00000157636 117 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm26321-201ENSMUST00000157740 242 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm22765-201ENSMUST00000158371 128 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm25617-201ENSMUST00000179548 133 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm27796-201ENSMUST00000183863 261 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm27185-201ENSMUST00000184296 247 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm29134-201ENSMUST00000186579 126 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm28241-201ENSMUST00000190916 235 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm37616-201ENSMUST00000193974 322 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Ighv1-21-201ENSMUST00000194856 351 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm25617-202ENSMUST00000198387 132 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm44411-201ENSMUST00000204172 349 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm44134-202ENSMUST00000204777 545 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm9278-201ENSMUST00000205508 553 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm45590-201ENSMUST00000209715 262 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm8423-201ENSMUST00000211387 607 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm17849-201ENSMUST00000219788 853 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm24621-201ENSMUST00000082679 140 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Trim39Q9ESN2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms