Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm15168-201ENSMUST00000121057 316 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm23121-201ENSMUST00000157653 173 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm26950-201ENSMUST00000182734 498 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm37961-201ENSMUST00000192729 299 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm43350-201ENSMUST00000196382 711 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm8891-201ENSMUST00000198546 832 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm42990-201ENSMUST00000199231 312 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm18100-201ENSMUST00000200897 452 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm6051-201ENSMUST00000201529 352 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr881-201ENSMUST00000074611 948 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.38□□□□□ -1.71
Cdc40Q9DC48 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm12261-201ENSMUST00000117499 645 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm15120-201ENSMUST00000120602 301 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm13867-201ENSMUST00000120844 395 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm12893-201ENSMUST00000121732 275 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm26085-201ENSMUST00000157900 116 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm16589-201ENSMUST00000159522 918 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm22177-201ENSMUST00000175002 158 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm27875-201ENSMUST00000184425 123 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm27387-201ENSMUST00000184583 116 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm18183-201ENSMUST00000191024 615 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm8458-201ENSMUST00000196658 819 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm4410-201ENSMUST00000199349 686 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm4574-201ENSMUST00000207804 542 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm44845-201ENSMUST00000208773 335 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm6988-201ENSMUST00000222676 375 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms