Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm16394-201ENSMUST00000117289 675 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm11879-201ENSMUST00000121885 702 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm25806-201ENSMUST00000122782 122 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm22842-201ENSMUST00000157709 118 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm25898-201ENSMUST00000158303 106 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm22675-201ENSMUST00000158430 104 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm23824-201ENSMUST00000158741 276 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm22701-201ENSMUST00000175371 291 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm6900-201ENSMUST00000178971 342 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Mir6411-201ENSMUST00000183556 108 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm28151-201ENSMUST00000189404 951 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm37193-201ENSMUST00000193087 513 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm43652-201ENSMUST00000196219 675 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm44431-201ENSMUST00000203500 413 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm45724-201ENSMUST00000213031 420 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm23452-201ENSMUST00000083327 107 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.71□□□□□ -1.34
Trim11Q99PQ2 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm42440-201ENSMUST00000197906 2284 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm14897-201ENSMUST00000118213 207 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm15312-201ENSMUST00000118827 271 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm15791-201ENSMUST00000120365 319 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm15309-201ENSMUST00000121644 240 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm9597-201ENSMUST00000171913 602 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm24155-201ENSMUST00000175259 110 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm23631-201ENSMUST00000175291 123 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm25598-201ENSMUST00000179031 107 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm21399-201ENSMUST00000180210 597 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm6631-201ENSMUST00000193699 559 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm18427-201ENSMUST00000195422 515 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm44494-201ENSMUST00000196760 129 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm22897-202ENSMUST00000197782 127 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm6929-201ENSMUST00000210930 468 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm7692-201ENSMUST00000213534 409 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 CR974485.1-201ENSMUST00000222408 402 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm8256-203ENSMUST00000228692 591 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms