Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.6□□□□□ -1.83
Nup35Q8R4R6 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Nup35Q8R4R6 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm22953-201ENSMUST00000116724 101 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm11877-201ENSMUST00000118921 852 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm12564-201ENSMUST00000119860 321 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm25106-201ENSMUST00000122672 134 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm24898-201ENSMUST00000158133 106 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm17421-201ENSMUST00000167845 674 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm17044-201ENSMUST00000168549 828 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm9320-201ENSMUST00000184151 473 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm29610-201ENSMUST00000187749 453 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm43774-201ENSMUST00000196327 878 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm43856-201ENSMUST00000197004 369 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm43382-201ENSMUST00000198954 838 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm44221-201ENSMUST00000203552 388 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm45200-201ENSMUST00000207434 919 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 AC098742.1-201ENSMUST00000227945 373 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm43341-201ENSMUST00000200104 1308 ntBASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Nup35Q8R4R6 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.59□□□□□ -1.84
Nup35Q8R4R6 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nup35Q8R4R6 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Nup35Q8R4R6 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Nup35Q8R4R6 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm37569-201ENSMUST00000192111 1722 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm22498-201ENSMUST00000104497 86 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm4596-201ENSMUST00000117197 442 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm12285-201ENSMUST00000117347 233 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm14521-201ENSMUST00000119545 350 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm22514-201ENSMUST00000122547 308 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm16345-201ENSMUST00000146065 158 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm26153-201ENSMUST00000157433 127 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm22084-201ENSMUST00000157585 105 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Mir3080-201ENSMUST00000175010 79 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm29159-201ENSMUST00000187969 379 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm37436-201ENSMUST00000193842 1085 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm43350-201ENSMUST00000196382 711 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm42566-201ENSMUST00000197120 643 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm42437-201ENSMUST00000197263 923 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm45392-201ENSMUST00000210441 214 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 AC157085.1-201ENSMUST00000216343 162 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 AC161114.1-201ENSMUST00000218223 474 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 Gm3338-201ENSMUST00000220982 269 ntBASIC3.58□□□□□ -1.84
Nup35Q8R4R6 AC154270.1-201ENSMUST00000227226 426 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms