Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm18465-201ENSMUST00000207468 369 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm18464-201ENSMUST00000207803 420 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm18458-201ENSMUST00000207908 369 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm18461-201ENSMUST00000208421 420 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm45317-201ENSMUST00000210385 223 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm18242-201ENSMUST00000218455 542 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm26437-201ENSMUST00000082595 105 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28bQ8CEG5 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm9427-201ENSMUST00000116187 651 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm11866-201ENSMUST00000120209 335 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm14122-201ENSMUST00000122076 973 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm3757-201ENSMUST00000125878 675 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm23496-201ENSMUST00000157741 248 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm22940-201ENSMUST00000158560 155 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm16545-201ENSMUST00000161968 463 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm17159-201ENSMUST00000169043 482 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm20657-201ENSMUST00000177079 515 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm4557-201ENSMUST00000185826 907 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm4526-201ENSMUST00000186039 920 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm8708-201ENSMUST00000188500 906 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm3489-201ENSMUST00000190083 528 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm38330-201ENSMUST00000192743 959 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm10292-202ENSMUST00000193165 585 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Trbv11-201ENSMUST00000194354 260 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm43491-201ENSMUST00000197133 784 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm43895-201ENSMUST00000203219 855 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm5655-201ENSMUST00000221078 901 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm9202-201ENSMUST00000223036 437 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 AC174797.4-201ENSMUST00000225510 347 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm4822-201ENSMUST00000077551 479 ntBASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28bQ8CEG5 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms