Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 n-R5s79-201ENSMUST00000083071 120 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.95□□□□□ -1.3
Trim47Q8C0E3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm22019-201ENSMUST00000104359 96 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm22710-201ENSMUST00000116892 125 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm22714-201ENSMUST00000116894 78 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm13170-201ENSMUST00000119716 643 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm9005-201ENSMUST00000119908 607 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Mup-ps18-201ENSMUST00000120145 531 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm14761-201ENSMUST00000121363 262 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm14695-201ENSMUST00000121721 282 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm12693-201ENSMUST00000121965 483 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm25982-201ENSMUST00000157920 101 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm23896-201ENSMUST00000158109 130 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm16566-201ENSMUST00000160387 910 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm25065-201ENSMUST00000177914 132 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm25891-201ENSMUST00000180050 132 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm28995-201ENSMUST00000186625 261 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm8860-201ENSMUST00000193160 445 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm2040-201ENSMUST00000202979 289 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 AC069561.3-201ENSMUST00000217321 114 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm18507-201ENSMUST00000218855 525 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm3800-201ENSMUST00000221086 554 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm24144-201ENSMUST00000082632 111 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim47Q8C0E3 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.94□□□□□ -1.3
Trim47Q8C0E3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm13818-201ENSMUST00000119441 511 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm12638-201ENSMUST00000119531 298 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm15480-201ENSMUST00000120442 519 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm23214-201ENSMUST00000122716 157 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm26410-201ENSMUST00000157670 261 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm18505-201ENSMUST00000187360 790 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm37658-201ENSMUST00000192672 315 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm37430-201ENSMUST00000193039 196 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm43541-201ENSMUST00000197208 581 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm5886-202ENSMUST00000203957 522 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC6.93□□□□□ -1.3
Trim47Q8C0E3 Gm19880-201ENSMUST00000207731 318 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms