Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Usp40Q8BWR4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm42681-201ENSMUST00000197999 1611 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm22020-201ENSMUST00000104358 136 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm12285-201ENSMUST00000117347 233 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm12636-201ENSMUST00000117395 624 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm8202-201ENSMUST00000117682 310 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm13000-201ENSMUST00000120937 496 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm23111-201ENSMUST00000122652 105 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm23228-201ENSMUST00000157296 270 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm24217-201ENSMUST00000158260 133 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm24175-201ENSMUST00000158931 129 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm37884-201ENSMUST00000191857 818 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm35212-201ENSMUST00000196672 606 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 AL645522.1-201ENSMUST00000197692 104 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm19201-201ENSMUST00000210127 778 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 AC154851.2-201ENSMUST00000222172 644 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 AC241593.2-201ENSMUST00000225099 510 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Gm42598-201ENSMUST00000200110 2437 ntBASIC7.05□□□□□ -1.28
Usp40Q8BWR4 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Naip3-201ENSMUST00000118082 4208 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm24855-201ENSMUST00000104848 97 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm2003-201ENSMUST00000118537 636 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm11790-201ENSMUST00000119569 455 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm14907-201ENSMUST00000121948 854 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm13149-201ENSMUST00000122071 339 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm1989-201ENSMUST00000126244 636 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm26468-201ENSMUST00000158644 106 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm26092-201ENSMUST00000179798 97 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm28614-201ENSMUST00000186483 458 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm18426-201ENSMUST00000191874 973 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm38329-201ENSMUST00000193473 427 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm43237-201ENSMUST00000196835 1044 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm4859-201ENSMUST00000199625 787 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm34224-201ENSMUST00000204606 364 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 AC142273.1-201ENSMUST00000213723 673 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 AC161269.1-201ENSMUST00000228426 318 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 mt-Tr-201ENSMUST00000082412 68 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Gm22826-201ENSMUST00000083774 165 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 AW046200-203ENSMUST00000211787 2479 ntBASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Usp40Q8BWR4 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Gm38137-201ENSMUST00000193735 1401 ntBASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.03□□□□□ -1.28
Usp40Q8BWR4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms