Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.15□□□□□ -1.59
Ubfd1Q78JW9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm23593-201ENSMUST00000104309 120 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm11699-201ENSMUST00000119016 401 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm12413-201ENSMUST00000121508 312 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm13007-201ENSMUST00000121866 365 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm13077-201ENSMUST00000121941 484 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm13214-201ENSMUST00000122137 408 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm25865-201ENSMUST00000158247 104 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm7316-201ENSMUST00000165395 445 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Mir5112-201ENSMUST00000174897 60 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm43848-201ENSMUST00000198060 1247 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm43418-201ENSMUST00000201334 428 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm45422-201ENSMUST00000211476 246 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm5176-202ENSMUST00000220267 583 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC150560.3-201ENSMUST00000227442 455 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm22741-201ENSMUST00000083438 165 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm10704-201ENSMUST00000098952 730 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ubfd1Q78JW9 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm11484-201ENSMUST00000119808 338 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm8051-201ENSMUST00000120464 466 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm13009-201ENSMUST00000121307 267 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm5924-201ENSMUST00000132554 871 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm24734-201ENSMUST00000158860 262 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm17655-201ENSMUST00000167969 255 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm21809-201ENSMUST00000178495 468 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm17412-201ENSMUST00000179261 468 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm29281-201ENSMUST00000188077 381 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm21617-201ENSMUST00000188297 691 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm7825-201ENSMUST00000204046 416 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Gm44277-201ENSMUST00000205128 649 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.13□□□□□ -1.59
Ubfd1Q78JW9 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms