Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm13250-201ENSMUST00000117209 753 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm12598-201ENSMUST00000117333 830 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm16106-201ENSMUST00000119187 294 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm23441-201ENSMUST00000157268 127 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm23317-201ENSMUST00000157999 129 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm9890-201ENSMUST00000171867 537 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm8614-201ENSMUST00000182528 978 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Mir7031-201ENSMUST00000183860 65 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Mir6410-201ENSMUST00000184204 104 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm29513-201ENSMUST00000185741 202 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm37438-201ENSMUST00000192813 393 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Igkv12-40-201ENSMUST00000199208 347 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm17911-201ENSMUST00000210806 877 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim28Q62318 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim28Q62318 Gm25099-201ENSMUST00000093716 116 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm15170-201ENSMUST00000121593 2023 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim28Q62318 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Gm45324-201ENSMUST00000211193 5638 ntBASIC6.41□□□□□ -1.38
Trim28Q62318 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Trim28Q62318 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim28Q62318 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim28Q62318 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim28Q62318 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm24855-201ENSMUST00000104848 97 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm14909-201ENSMUST00000117853 351 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm24944-201ENSMUST00000158330 128 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm28060-201ENSMUST00000191554 189 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm43582-201ENSMUST00000196149 343 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm43367-201ENSMUST00000199986 625 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm18193-201ENSMUST00000210017 772 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm6850-201ENSMUST00000210031 530 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Gm9655-201ENSMUST00000211321 1284 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Trim28Q62318 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.4□□□□□ -1.38
Trim28Q62318 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 AC154239.2-201ENSMUST00000227859 233 ntBASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim28Q62318 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim28Q62318 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim28Q62318 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim28Q62318 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim28Q62318 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.4□□□□□ -1.39
Trim28Q62318 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Trim28Q62318 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC6.4□□□□□ -1.39
Trim28Q62318 Gm14797-201ENSMUST00000119378 1480 ntBASIC6.4□□□□□ -1.39
Trim28Q62318 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim28Q62318 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm43319-201ENSMUST00000198036 2270 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim28Q62318 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm11631-201ENSMUST00000119220 156 ntBASIC6.39□□□□□ -1.39
Trim28Q62318 Gm11910-201ENSMUST00000121624 432 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms