Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Mir3104-201ENSMUST00000174911 63 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm25525-201ENSMUST00000177701 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm26178-201ENSMUST00000177706 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm26465-201ENSMUST00000178517 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm24317-201ENSMUST00000178536 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm25021-201ENSMUST00000179184 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm22995-201ENSMUST00000179670 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm24424-201ENSMUST00000179714 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm24389-201ENSMUST00000179962 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm25672-201ENSMUST00000180111 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm29163-201ENSMUST00000188029 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm9057-201ENSMUST00000198791 296 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm45438-201ENSMUST00000210242 564 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 AC163743.1-201ENSMUST00000224309 270 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm23815-201ENSMUST00000083231 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm23520-201ENSMUST00000093736 107 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 AC139941.2-201ENSMUST00000221565 1824 ntBASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim41Q5NCC3 Gm43326-201ENSMUST00000198459 1638 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 AC166358.5-201ENSMUST00000220706 1302 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Snord72-201ENSMUST00000104549 81 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm12482-201ENSMUST00000120435 630 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm12399-201ENSMUST00000121475 446 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm23546-201ENSMUST00000158211 137 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm26988-201ENSMUST00000183296 945 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm27645-201ENSMUST00000183348 77 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm37603-201ENSMUST00000192368 219 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gm26056-201ENSMUST00000083043 104 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim41Q5NCC3 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm3616-201ENSMUST00000174430 2514 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm3683-201ENSMUST00000175701 2513 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm25879-201ENSMUST00000104330 107 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm22932-201ENSMUST00000175510 72 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm20923-201ENSMUST00000190009 319 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm43494-201ENSMUST00000197672 388 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm43114-201ENSMUST00000198298 343 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm8942-201ENSMUST00000217892 400 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC124826.1-201ENSMUST00000221651 325 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC164164.2-201ENSMUST00000221809 785 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC154552.4-201ENSMUST00000222171 151 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC161884.2-201ENSMUST00000224513 227 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC167192.2-201ENSMUST00000224794 198 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC137117.1-201ENSMUST00000226912 441 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 AC123665.6-201ENSMUST00000228568 538 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm37780-201ENSMUST00000194117 1873 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm37730-201ENSMUST00000192432 2211 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Gm43924-201ENSMUST00000204851 1736 ntBASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms