Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Upf3bQ3ULL6 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm15779-201ENSMUST00000117470 412 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm12734-201ENSMUST00000120228 948 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm16060-201ENSMUST00000153140 478 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm22243-201ENSMUST00000178754 120 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm21850-201ENSMUST00000179792 359 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm27387-201ENSMUST00000184583 116 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm9443-201ENSMUST00000188406 816 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm36998-201ENSMUST00000193205 704 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm38221-201ENSMUST00000195146 365 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm18791-201ENSMUST00000204611 726 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm45610-201ENSMUST00000209227 784 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Upf3bQ3ULL6 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm3053-201ENSMUST00000161709 616 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm26993-201ENSMUST00000182766 789 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm21856-201ENSMUST00000187547 696 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm21735-201ENSMUST00000190360 696 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm38046-201ENSMUST00000192733 550 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm8458-201ENSMUST00000196658 819 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm43895-201ENSMUST00000203219 855 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm20586-201ENSMUST00000210122 547 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm45392-201ENSMUST00000210441 214 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Gm43921-201ENSMUST00000204296 1792 ntBASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Upf3bQ3ULL6 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm14861-201ENSMUST00000119451 455 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm8051-201ENSMUST00000120464 466 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm23082-201ENSMUST00000157852 133 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm16114-201ENSMUST00000161930 300 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm28385-201ENSMUST00000185671 292 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm6075-201ENSMUST00000186816 486 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm5066-201ENSMUST00000188479 822 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm42999-201ENSMUST00000198049 786 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm42990-201ENSMUST00000199231 312 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm8319-201ENSMUST00000205708 641 ntBASIC4.84□□□□□ -1.63
Upf3bQ3ULL6 Gm5418-201ENSMUST00000206932 528 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms