Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Gm37356-201ENSMUST00000193362 1613 ntBASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.9□□□□□ -1.62
Upf3aQ3ULJ3 Gm23273-201ENSMUST00000104058 135 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm14753-201ENSMUST00000118503 246 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm15385-201ENSMUST00000118725 667 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm12994-201ENSMUST00000119601 447 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm13162-201ENSMUST00000121481 454 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm12893-201ENSMUST00000121732 275 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm4557-201ENSMUST00000185826 907 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm4526-201ENSMUST00000186039 920 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm29161-201ENSMUST00000188250 699 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm8708-201ENSMUST00000188500 906 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm272-201ENSMUST00000222073 919 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm25134-201ENSMUST00000082646 160 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 AC122408.2-201ENSMUST00000217901 1391 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.9□□□□□ -1.63
Upf3aQ3ULJ3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm15185-201ENSMUST00000117397 746 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm14539-201ENSMUST00000117527 174 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm7363-201ENSMUST00000119883 399 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm11510-201ENSMUST00000120278 347 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm13484-201ENSMUST00000120738 412 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm23905-201ENSMUST00000157568 109 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm26362-201ENSMUST00000158865 315 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Mir6907-201ENSMUST00000183764 71 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm4854-201ENSMUST00000185902 574 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Mrgprb13-201ENSMUST00000188191 985 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm20239-201ENSMUST00000196610 982 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm42824-201ENSMUST00000199361 247 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Upf3aQ3ULJ3 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm15058-201ENSMUST00000117689 458 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm11878-201ENSMUST00000117908 400 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm12704-201ENSMUST00000119789 464 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm14881-201ENSMUST00000120366 372 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm14303-201ENSMUST00000121320 171 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm14369-201ENSMUST00000121355 285 ntBASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.88□□□□□ -1.63
Upf3aQ3ULJ3 Gm5963-201ENSMUST00000143451 236 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms