Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col17a1Q07563 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm15018-201ENSMUST00000117090 633 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm9836-201ENSMUST00000117132 216 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm12105-201ENSMUST00000120846 779 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm27688-201ENSMUST00000183634 91 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm17771-201ENSMUST00000194477 1147 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm34779-201ENSMUST00000210036 263 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm45628-201ENSMUST00000210849 274 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm45344-201ENSMUST00000211610 341 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 AC123835.1-201ENSMUST00000214362 670 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm4928-201ENSMUST00000219622 850 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC7.55□□□□□ -1.2
Col17a1Q07563 AC154548.1-201ENSMUST00000225844 3838 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 AC154335.2-201ENSMUST00000225916 638 ntBASIC7.55□□□□□ -1.2
Col17a1Q07563 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Col17a1Q07563 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Col17a1Q07563 Gm2080-201ENSMUST00000211299 1573 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Gm45853-201ENSMUST00000212310 3171 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 AC122024.1-201ENSMUST00000219276 4850 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col17a1Q07563 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col17a1Q07563 Gm14358-201ENSMUST00000118458 403 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Gm12335-201ENSMUST00000119738 327 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col17a1Q07563 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col17a1Q07563 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Gm27817-201ENSMUST00000184302 233 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Gm27715-201ENSMUST00000184714 260 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 Mir7118-201ENSMUST00000197760 61 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 AC127302.1-201ENSMUST00000215973 1111 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 AC121978.1-201ENSMUST00000228357 380 ntBASIC7.54□□□□□ -1.2
Col17a1Q07563 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col17a1Q07563 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm37925-201ENSMUST00000195352 4255 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm43210-201ENSMUST00000196743 6152 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm44171-201ENSMUST00000203701 2109 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm22115-201ENSMUST00000103976 133 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm23923-201ENSMUST00000104108 133 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm26367-201ENSMUST00000104165 132 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm12982-201ENSMUST00000117408 190 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm14599-201ENSMUST00000120469 474 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm11679-201ENSMUST00000121830 779 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm19066-201ENSMUST00000193232 1078 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col17a1Q07563 AC158631.2-201ENSMUST00000219999 478 ntBASIC7.53□□□□□ -1.2
Col17a1Q07563 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms