Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm22870-201ENSMUST00000157501 112 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm3170-201ENSMUST00000168753 850 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm3348-201ENSMUST00000177813 850 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm27875-201ENSMUST00000184425 123 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm28211-201ENSMUST00000190920 315 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm28927-201ENSMUST00000191528 272 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm19032-201ENSMUST00000208584 592 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm18414-201ENSMUST00000210858 694 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm8942-201ENSMUST00000217892 400 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm8288-201ENSMUST00000223406 593 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 AC156790.3-201ENSMUST00000226200 254 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox9Q04887 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm24029-201ENSMUST00000083928 143 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.83□□□□□ -1.48
Sox9Q04887 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox9Q04887 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Sox9Q04887 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm14751-201ENSMUST00000117693 222 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm24517-201ENSMUST00000122560 107 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm23954-201ENSMUST00000157213 353 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm20648-201ENSMUST00000175815 328 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm26652-202ENSMUST00000181672 475 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Mir6411-201ENSMUST00000183556 108 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm7639-201ENSMUST00000212608 484 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 AC116465.1-201ENSMUST00000220324 235 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sox9Q04887 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sox9Q04887 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sox9Q04887 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.82□□□□□ -1.48
Sox9Q04887 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sox9Q04887 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Sox9Q04887 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Sox9Q04887 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Sox9Q04887 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox9Q04887 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sox9Q04887 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox9Q04887 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Sox9Q04887 Gm22019-201ENSMUST00000104359 96 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Mir190b-201ENSMUST00000104803 80 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm12131-201ENSMUST00000117479 359 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm12641-201ENSMUST00000117874 985 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.81□□□□□ -1.48
Sox9Q04887 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms