Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Zfp389-201ENSMUST00000118425 675 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm15312-201ENSMUST00000118827 271 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm14991-201ENSMUST00000119913 598 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm13488-201ENSMUST00000120419 179 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm15309-201ENSMUST00000121644 240 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm26172-201ENSMUST00000158421 134 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm27313-201ENSMUST00000183500 142 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Mir6343-201ENSMUST00000183584 84 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Mir496b-201ENSMUST00000184935 113 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm43370-201ENSMUST00000196437 284 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm44456-201ENSMUST00000196554 89 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm21006-201ENSMUST00000196930 667 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm43559-201ENSMUST00000198755 466 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm44409-201ENSMUST00000198810 166 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm44281-201ENSMUST00000203090 166 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm45034-201ENSMUST00000206831 482 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm44984-201ENSMUST00000207802 394 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm2829-201ENSMUST00000213121 499 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Clec2j-201ENSMUST00000032517 515 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.09□□□□□ -1.59
Col8a1Q00780 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Col8a1Q00780 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
Col8a1Q00780 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.09□□□□□ -1.6
Col8a1Q00780 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Col8a1Q00780 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Col8a1Q00780 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.09□□□□□ -1.6
Col8a1Q00780 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col8a1Q00780 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm25537-201ENSMUST00000103851 109 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Mir467h-201ENSMUST00000116759 121 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm11372-201ENSMUST00000117348 570 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm16089-201ENSMUST00000117679 336 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm15988-201ENSMUST00000118677 367 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm14106-201ENSMUST00000119382 438 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms