Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm9443-201ENSMUST00000188406 816 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm18442-201ENSMUST00000220925 639 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm6065-201ENSMUST00000081336 492 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm23302-201ENSMUST00000082710 100 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm6043-201ENSMUST00000099961 492 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.02□□□□□ -1.77
Nkx3-1P97436 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx3-1P97436 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Mir879-201ENSMUST00000104703 76 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm12893-201ENSMUST00000121732 275 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm24689-201ENSMUST00000157760 104 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm22536-201ENSMUST00000158171 134 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm28064-201ENSMUST00000185639 858 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm8823-201ENSMUST00000193158 433 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm37614-201ENSMUST00000195645 210 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm44485-201ENSMUST00000199569 137 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm17956-201ENSMUST00000199931 838 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm18462-201ENSMUST00000208112 417 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm2059-201ENSMUST00000212025 287 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm3338-201ENSMUST00000220982 269 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nkx3-1P97436 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.01□□□□□ -1.77
Nkx3-1P97436 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nkx3-1P97436 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Nkx3-1P97436 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC4□□□□□ -1.77
Nkx3-1P97436 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4□□□□□ -1.77
Nkx3-1P97436 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4□□□□□ -1.77
Nkx3-1P97436 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4□□□□□ -1.77
Nkx3-1P97436 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm15075-201ENSMUST00000122187 477 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm23902-201ENSMUST00000157571 134 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nkx3-1P97436 Gm21070-201ENSMUST00000182425 985 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Mir3620-201ENSMUST00000184710 61 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm29228-201ENSMUST00000185489 418 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm3145-201ENSMUST00000188584 220 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm19131-201ENSMUST00000203408 789 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm45499-201ENSMUST00000211656 280 ntBASIC4□□□□□ -1.77
Nkx3-1P97436 Gm7807-201ENSMUST00000212475 578 ntBASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms