Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm15772-201ENSMUST00000118533 438 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm13367-201ENSMUST00000119955 796 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm13484-201ENSMUST00000120738 412 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm25292-201ENSMUST00000122797 322 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm18547-201ENSMUST00000192439 811 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm38011-201ENSMUST00000193312 279 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm18011-201ENSMUST00000203717 565 ntBASIC5.32□□□□□ -1.56
Lig3P97386 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.32□□□□□ -1.56
Lig3P97386 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.32□□□□□ -1.56
Lig3P97386 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Olfr844-201ENSMUST00000054106 930 ntBASIC5.32□□□□□ -1.56
Lig3P97386 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lig3P97386 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lig3P97386 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Lig3P97386 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Lig3P97386 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Lig3P97386 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lig3P97386 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm42841-201ENSMUST00000199806 1932 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm12591-201ENSMUST00000122407 1177 ntBASIC5.31□□□□□ -1.56
Lig3P97386 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.31□□□□□ -1.56
Lig3P97386 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm24113-201ENSMUST00000157477 276 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm26034-201ENSMUST00000158154 116 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm6647-201ENSMUST00000170514 641 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm24561-201ENSMUST00000175182 95 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm5284-201ENSMUST00000199053 903 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm44559-201ENSMUST00000207177 1012 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm45236-201ENSMUST00000208632 229 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm18899-201ENSMUST00000217663 546 ntBASIC5.31□□□□□ -1.56
Lig3P97386 AC126043.1-201ENSMUST00000221304 1141 ntBASIC5.31□□□□□ -1.56
Lig3P97386 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.31□□□□□ -1.56
Lig3P97386 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.31□□□□□ -1.56
Lig3P97386 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.31□□□□□ -1.56
Lig3P97386 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.31□□□□□ -1.56
Lig3P97386 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
Lig3P97386 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lig3P97386 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lig3P97386 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Lig3P97386 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Lig3P97386 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Lig3P97386 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.31□□□□□ -1.56
Lig3P97386 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.31□□□□□ -1.56
Lig3P97386 Gm18300-201ENSMUST00000192792 1406 ntBASIC5.31□□□□□ -1.56
Lig3P97386 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lig3P97386 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.3□□□□□ -1.56
Lig3P97386 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lig3P97386 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Lig3P97386 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
Lig3P97386 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Lig3P97386 Mir879-201ENSMUST00000104703 76 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm7657-201ENSMUST00000118851 666 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm22958-201ENSMUST00000122512 184 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lig3P97386 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Lig3P97386 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.3□□□□□ -1.56
Lig3P97386 Gm8614-201ENSMUST00000182528 978 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm26993-201ENSMUST00000182766 789 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.3□□□□□ -1.56
Lig3P97386 Gm28615-201ENSMUST00000187527 482 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms