Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3b6P59708 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.4□□□□□ -1.55
Sf3b6P59708 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.4□□□□□ -1.55
Sf3b6P59708 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.4□□□□□ -1.55
Sf3b6P59708 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3b6P59708 Gm6818-201ENSMUST00000190556 2558 ntBASIC5.4□□□□□ -1.55
Sf3b6P59708 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3b6P59708 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Sf3b6P59708 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm25785-201ENSMUST00000104129 125 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm26376-201ENSMUST00000104784 110 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm11859-201ENSMUST00000118099 455 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm13818-201ENSMUST00000119441 511 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm7071-201ENSMUST00000120458 462 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm16331-201ENSMUST00000144274 498 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm24682-201ENSMUST00000158764 137 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Mir6401-201ENSMUST00000184499 109 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm27588-201ENSMUST00000185096 263 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm37358-201ENSMUST00000195492 479 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm43467-201ENSMUST00000197441 437 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm42850-201ENSMUST00000202094 201 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm44818-201ENSMUST00000206608 358 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm6702-201ENSMUST00000208496 471 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm18194-201ENSMUST00000210455 481 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm3690-201ENSMUST00000211341 262 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 CT025602.1-201ENSMUST00000227281 382 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3b6P59708 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.39□□□□□ -1.55
Sf3b6P59708 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Sf3b6P59708 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Sf3b6P59708 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3b6P59708 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Sf3b6P59708 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.38□□□□□ -1.55
Sf3b6P59708 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Sf3b6P59708 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Sf3b6P59708 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.38□□□□□ -1.55
Sf3b6P59708 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms