Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm23897-201ENSMUST00000158110 158 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Gm6673-201ENSMUST00000166114 700 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm3084-201ENSMUST00000169967 598 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Mir5710-201ENSMUST00000176884 69 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox3P53784 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox3P53784 Mir7658-201ENSMUST00000184043 57 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm37632-201ENSMUST00000191811 1142 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Gm37097-201ENSMUST00000193676 336 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 Gm25592-201ENSMUST00000082635 131 ntBASIC4.54□□□□□ -1.68
Sox3P53784 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.54□□□□□ -1.68
Sox3P53784 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox3P53784 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox3P53784 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Sox3P53784 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox3P53784 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox3P53784 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox3P53784 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Sox3P53784 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox3P53784 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox3P53784 Gm23594-201ENSMUST00000104307 134 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm14575-201ENSMUST00000117210 560 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm15493-201ENSMUST00000119461 528 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Gm23441-201ENSMUST00000157268 127 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.53□□□□□ -1.68
Sox3P53784 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Gm28957-201ENSMUST00000190174 373 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm36638-201ENSMUST00000193295 400 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm2147-201ENSMUST00000193588 639 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm43580-201ENSMUST00000202892 284 ntBASIC4.53□□□□□ -1.68
Sox3P53784 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.53□□□□□ -1.68
Sox3P53784 AC110816.1-201ENSMUST00000218559 980 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC4.53□□□□□ -1.68
Sox3P53784 Gm6988-201ENSMUST00000222676 375 ntBASIC4.53□□□□□ -1.68
Sox3P53784 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.53□□□□□ -1.68
Sox3P53784 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox3P53784 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox3P53784 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Gm42905-201ENSMUST00000196237 1611 ntBASIC4.53□□□□□ -1.68
Sox3P53784 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Sox3P53784 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox3P53784 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
Sox3P53784 Gm9597-202ENSMUST00000227632 1387 ntBASIC4.53□□□□□ -1.69
Sox3P53784 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Sox3P53784 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox3P53784 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.52□□□□□ -1.69
Sox3P53784 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox3P53784 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox3P53784 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Gm11914-201ENSMUST00000117094 507 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Gm15357-201ENSMUST00000119160 285 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Gm16463-201ENSMUST00000120527 721 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Gm24371-201ENSMUST00000122662 267 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.52□□□□□ -1.69
Sox3P53784 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC4.52□□□□□ -1.69
Sox3P53784 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox3P53784 Gm23905-201ENSMUST00000157568 109 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.52□□□□□ -1.69
Sox3P53784 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms