Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Shmt1P50431 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.66□□□□□ -1.5
Shmt1P50431 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.66□□□□□ -1.5
Shmt1P50431 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.66□□□□□ -1.5
Shmt1P50431 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Shmt1P50431 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.66□□□□□ -1.5
Shmt1P50431 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.65□□□□□ -1.5
Shmt1P50431 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Shmt1P50431 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm22266-201ENSMUST00000104011 138 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm11965-201ENSMUST00000122017 277 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm15838-201ENSMUST00000161575 180 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm7316-201ENSMUST00000165395 445 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm17907-201ENSMUST00000173150 710 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm37996-201ENSMUST00000191859 367 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm33952-201ENSMUST00000197795 408 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm44134-202ENSMUST00000204777 545 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.65□□□□□ -1.5
Shmt1P50431 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Shmt1P50431 Gm22456-201ENSMUST00000082578 125 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Gm25187-201ENSMUST00000083906 133 ntBASIC5.65□□□□□ -1.5
Shmt1P50431 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Shmt1P50431 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.51
Shmt1P50431 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Shmt1P50431 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Shmt1P50431 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Shmt1P50431 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Shmt1P50431 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Shmt1P50431 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Shmt1P50431 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Shmt1P50431 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.65□□□□□ -1.51
Shmt1P50431 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Shmt1P50431 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm2348-201ENSMUST00000108782 300 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm14885-201ENSMUST00000117969 496 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm12985-201ENSMUST00000118376 183 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm13640-201ENSMUST00000118445 264 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm14607-201ENSMUST00000119119 491 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Shmt1P50431 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Shmt1P50431 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Mir6986-201ENSMUST00000184483 58 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm37719-201ENSMUST00000194615 292 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm37445-201ENSMUST00000195318 242 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm44048-201ENSMUST00000204531 361 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm8264-201ENSMUST00000217801 465 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms