Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Gm37010-201ENSMUST00000194539 1704 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Traf1P39428 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.64□□□□□ -1.51
Traf1P39428 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.64□□□□□ -1.51
Traf1P39428 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.64□□□□□ -1.51
Traf1P39428 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm12039-201ENSMUST00000118219 180 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm11385-201ENSMUST00000121513 570 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm26098-201ENSMUST00000157247 288 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm26354-201ENSMUST00000158221 129 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Traf1P39428 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Traf1P39428 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Gm27387-201ENSMUST00000184583 116 ntBASIC5.63□□□□□ -1.51
Traf1P39428 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm8599-201ENSMUST00000193033 457 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.63□□□□□ -1.51
Traf1P39428 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm43968-201ENSMUST00000203388 389 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm18011-201ENSMUST00000203717 565 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm45200-201ENSMUST00000207434 919 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Traf1P39428 Gm24917-201ENSMUST00000083935 104 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Traf1P39428 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.63□□□□□ -1.51
Traf1P39428 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.63□□□□□ -1.51
Traf1P39428 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Traf1P39428 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm23608-201ENSMUST00000104545 128 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm12112-201ENSMUST00000117772 231 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm12423-201ENSMUST00000118334 135 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm11877-201ENSMUST00000118921 852 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm13787-201ENSMUST00000120422 168 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Gm23318-201ENSMUST00000158000 108 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm25655-201ENSMUST00000158465 290 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Traf1P39428 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm8891-201ENSMUST00000198546 832 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm8106-201ENSMUST00000213123 523 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Traf1P39428 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.62□□□□□ -1.51
Traf1P39428 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.62□□□□□ -1.51
Traf1P39428 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms