Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col18a1P39061 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Col18a1P39061 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm45324-201ENSMUST00000211193 5638 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Col18a1P39061 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Col18a1P39061 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.75□□□□□ -1.33
Col18a1P39061 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Col18a1P39061 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm15038-201ENSMUST00000122144 296 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm23837-201ENSMUST00000122656 286 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm22326-201ENSMUST00000158897 351 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col18a1P39061 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm26828-201ENSMUST00000180640 172 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm19232-201ENSMUST00000211621 652 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm18899-201ENSMUST00000217663 546 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm42729-201ENSMUST00000201770 2930 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Col18a1P39061 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Col18a1P39061 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm15923-201ENSMUST00000119300 1169 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm12368-201ENSMUST00000122251 434 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC6.74□□□□□ -1.33
Col18a1P39061 Mir5710-201ENSMUST00000176884 69 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Mir6344-201ENSMUST00000183462 104 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Mir7047-201ENSMUST00000184595 64 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm18442-201ENSMUST00000220925 639 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.74□□□□□ -1.33
Col18a1P39061 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.74□□□□□ -1.33
Col18a1P39061 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col18a1P39061 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col18a1P39061 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm14086-201ENSMUST00000117152 173 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm14750-201ENSMUST00000118262 516 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm11433-201ENSMUST00000118318 228 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm6373-201ENSMUST00000121026 360 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm22819-201ENSMUST00000157445 303 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm27468-201ENSMUST00000183577 106 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.73□□□□□ -1.33
Col18a1P39061 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col18a1P39061 Gm20940-201ENSMUST00000197308 360 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm8035-201ENSMUST00000204625 687 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm45007-201ENSMUST00000206237 366 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 Gm5750-201ENSMUST00000218711 801 ntBASIC6.73□□□□□ -1.33
Col18a1P39061 AC122937.1-201ENSMUST00000226405 793 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms