Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37095-201ENSMUST00000195421 205 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 AC099760.1-201ENSMUST00000196300 153 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm43392-201ENSMUST00000196560 434 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm9560-201ENSMUST00000205012 1201 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm17915-201ENSMUST00000222077 548 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Sdc1P18828 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
Sdc1P18828 Mir28a-201ENSMUST00000083560 86 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Sdc1P18828 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sdc1P18828 Gm13928-201ENSMUST00000120326 1732 ntBASIC3.78□□□□□ -1.8
Sdc1P18828 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Sdc1P18828 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Sdc1P18828 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.81
Sdc1P18828 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Sdc1P18828 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm24170-201ENSMUST00000104124 133 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm25419-201ENSMUST00000104215 191 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm13250-201ENSMUST00000117209 753 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm6134-201ENSMUST00000117265 171 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm3267-201ENSMUST00000118671 473 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm14375-201ENSMUST00000119490 855 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm12880-201ENSMUST00000120652 494 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm13867-201ENSMUST00000120844 395 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm5391-201ENSMUST00000121155 613 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm14122-201ENSMUST00000122076 973 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm13092-201ENSMUST00000136346 260 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC3.77□□□□□ -1.81
Sdc1P18828 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm23960-201ENSMUST00000157206 131 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm22724-201ENSMUST00000158091 127 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm5777-201ENSMUST00000177265 448 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm6472-201ENSMUST00000178147 651 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Sdc1P18828 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm38181-201ENSMUST00000181357 720 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm27254-201ENSMUST00000183926 517 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm43586-201ENSMUST00000195948 310 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm43418-201ENSMUST00000201334 428 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm43762-201ENSMUST00000201521 295 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm17984-201ENSMUST00000205286 859 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 CT030182.2-201ENSMUST00000223569 620 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Sdc1P18828 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 BC023105-201ENSMUST00000073997 1227 ntBASIC3.77□□□□□ -1.81
Sdc1P18828 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Sdc1P18828 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Sdc1P18828 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 149.1 ms