Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm29097-201ENSMUST00000190273 422 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm28500-201ENSMUST00000190286 151 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18553-201ENSMUST00000194152 634 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm22897-201ENSMUST00000197860 128 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm44059-201ENSMUST00000204048 351 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18468-201ENSMUST00000207321 369 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18470-201ENSMUST00000207467 420 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18465-201ENSMUST00000207468 369 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18464-201ENSMUST00000207803 420 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18458-201ENSMUST00000207908 369 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm18461-201ENSMUST00000208421 420 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm19201-201ENSMUST00000210127 778 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm46138-201ENSMUST00000215294 426 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC3.99□□□□□ -1.77
Cdx1P18111 AC129085.4-201ENSMUST00000224536 570 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 AC117656.3-205ENSMUST00000224606 1205 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdx1P18111 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Cdx1P18111 Mir31-201ENSMUST00000083474 106 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 AC153532.3-201ENSMUST00000218660 3848 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Cdx1P18111 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC3.99□□□□□ -1.77
Cdx1P18111 AC115289.2-201ENSMUST00000223836 2803 ntBASIC3.99□□□□□ -1.77
Cdx1P18111 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.98□□□□□ -1.77
Cdx1P18111 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 AC102431.1-201ENSMUST00000223773 1449 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm22676-201ENSMUST00000116972 129 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm14046-201ENSMUST00000119389 509 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm26490-201ENSMUST00000157879 140 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm17177-201ENSMUST00000169144 483 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm8614-201ENSMUST00000182528 978 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Mir6343-201ENSMUST00000183584 84 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm27541-201ENSMUST00000184078 122 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm2914-201ENSMUST00000186120 328 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm37215-201ENSMUST00000194927 1259 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm5842-201ENSMUST00000195073 622 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.98□□□□□ -1.77
Cdx1P18111 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.98□□□□□ -1.77
Cdx1P18111 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 n-R5s167-201ENSMUST00000083227 121 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm25187-201ENSMUST00000083906 133 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm24917-201ENSMUST00000083935 104 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.98□□□□□ -1.77
Cdx1P18111 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Cdx1P18111 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Cdx1P18111 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Cdx1P18111 Gm17791-201ENSMUST00000185660 1501 ntBASIC3.97□□□□□ -1.77
Cdx1P18111 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms