Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.35□□□□□ -1.55
Hoxd3P09027 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Hoxd3P09027 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Hoxd3P09027 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AC138284.1-201ENSMUST00000214258 3236 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 AC161884.1-201ENSMUST00000225436 2174 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm14175-201ENSMUST00000119835 241 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm14353-201ENSMUST00000122200 869 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm23169-201ENSMUST00000157157 112 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm26101-201ENSMUST00000157246 105 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm17048-201ENSMUST00000179266 847 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm7867-201ENSMUST00000189856 546 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm42828-201ENSMUST00000199669 469 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm46231-201ENSMUST00000220152 314 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Mir7b-201ENSMUST00000083557 111 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Mir106b-201ENSMUST00000083580 82 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm25008-201ENSMUST00000083809 81 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm43181-201ENSMUST00000197001 2072 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Hoxd3P09027 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.34□□□□□ -1.55
Hoxd3P09027 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.34□□□□□ -1.56
Hoxd3P09027 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hoxd3P09027 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Hoxd3P09027 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.34□□□□□ -1.56
Hoxd3P09027 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.34□□□□□ -1.56
Hoxd3P09027 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm25877-201ENSMUST00000104326 129 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm24889-201ENSMUST00000104388 132 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm13176-201ENSMUST00000117910 477 ntBASIC5.33□□□□□ -1.56
Hoxd3P09027 Gm12512-201ENSMUST00000119620 217 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms